genelens API Documentation Modules Classes Names
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Module Index

  • genelens - GeneLens is a Python package for functional analysis of differentially expressed genes (DEGs) and biomarker prediction, integrating:
    • data - Base, additional and Example Data
      • exampl_data - Example Data for Feature selection from GSE36961
      • miRNET - Base and Additional for NetAnalyzer functionality
        • addData - for tissue_selector() function:
        • baseData - hsa_miRTarBase.csv = [miRNA;Target] for Homo Sapiens
    • enrichment - Module for conducting analysis of overrepresentation of gene sets in all signal pathways of Reactome with construction of dendrogram of intersection of overrepresented pathways taking into account weight parameter...
    • fselector - Machine learning pipeline for biomarker discovery
    • netanalyzer - Predicts genes functions via topological analysis of molecular networks
API Documentation for genelens, generated by pydoctor 24.11.2 at 2025-04-08 10:55:51.